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Table 13 Prediction results on seven independent PPIs datasets, PPIs of H. sapiens are used as the training set

From: Predicting protein-protein interactions using high-quality non-interacting pairs

Species Test pairs Negative
   NIP-SS NIP-RW Sub
C. elegans 4013 (interactions) 86.10% 78.11% 94.42%
E. coli 6984 (interactions) 85.34% 79.65% 92.68%
H. sapiens 1412 (interactions) 86.20% 85.03% 96.29%
H. pylori 1420 (interactions) 81.86% 79.15% 92.28%
M. musculus 313 (interactions) 85.64% 80.66% 96.10%
Mammalian 1937 (non-interactions) 15.69% 18.58% 4.67%
Mammalian-imbalanced 2250 (313 interactions, 1937 non-interactions) 23.45% 27.56% 17.75%