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Table 6 Functional homogeneity of mesoscale modules detected by Incremental Louvain algorithm, evaluated using three ontologies: MF, BP, and CC

From: Functional homogeneity and specificity of topological modules in human proteome

PPIN

MF

BP

CC

max

mean

std

max

mean

std

max

mean

std

Physical

Binary

1

0.57

0.28

1

0.67

0.29

1

0.65

0.28

Weighted

1

0.63

0.27

1

0.81

0.20

1

0.76

0.22

Functional

Binary

1

0.59

0.25

0.97

0.73

0.22

1

0.72

0.23

Weighted

0.97

0.69

0.25

1

0.85

0.16

1

0.72

0.24

Combined

Binary

1

0.60

0.26

1

0.72

0.26

1

0.70

0.24

Weighted

0.98

0.65

0.26

1

0.82

0.19

1

0.74

0.21