Table 1 Overlap between Obesity and T2D disease groups and the unsupervised cluster assignments produced from GMM with or without transformation and NBMB
From: Subject level clustering using a negative binomial model for small transcriptomic studies
| Â | Non-obese & Normal glucose tolerant | Non-obese & T2D | Obese & Normal glucose tolerant | Obese & T2D |
|---|---|---|---|---|
GMM None | ||||
 C1 | 16 (66.7%) | 4 (16.7%) | 4 (16.7%) | 8 (33.2%) |
 C2 | 8 (33.3%) | 4 (16.7%) | 8 (33.2%) | 8 (33.2%) |
 C3 | 0 | 8 (33.2%) | 4 (16.7%) | 4 (16.7%) |
 C4 | 0 | 4 (16.7%) | 8 (33.2%) | 4 (16.7%) |
 C5 | 0 | 4 (16.7%) | 0 | 0 |
GMM Blom | ||||
 C1 | 20 (83.3%) | 4 (16.7%) | 4 (16.7%) | 4 (16.7%) |
 C2 | 4 (16.7%) | 0 | 0 | 4 (16.7%) |
 C3 | 0 | 12 (50%) | 12 (50%) | 8 (33.4%) |
 C4 | 0 | 4 (16.7%) | 8 (33.4%) | 4 (16.7%) |
 C5 | 0 | 4 (16.7%) | 0 | 4 (16.7%) |
GMM Log | ||||
 C1 | 16 (66.7%) | 4 (16.7%) | 4 (16.7%) | 8 (33.2%) |
 C2 | 8 (33.3%) | 4 (16.7%) | 8 (33.2%) | 8 (33.2%) |
 C3 | 0 | 8 (33.2%) | 4 (16.7%) | 4 (16.7%) |
 C4 | 0 | 4 (16.7%) | 8 (33.2%) | 4 (16.7%) |
 C5 | 0 | 4 (16.7%) | 0 | 0 |
NBMB | ||||
 C1 | 24 (100%) | 8 (33.3%) | 8 (33.3%) | 12 (50%) |
 C2 | 0 | 16 (66.7%) | 16 (66.7%) | 12 (50%) |