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Table 1 Summary of scoring models and randomization methods

From: CoExpresso: assess the quantitative behavior of protein complexes in human cells

Model Abbrv. Output
Mean correlation MCOM Similarity to averaged abundance profile
Pairwise correlation PCOM Sum of pairwise similarities
Factor analysis FAM Weights for protein contribution to full set
Randomization Abbrv. Basis
Independent sampling IS Mix all values
Protein-centered sampling PCS Keep protein profiles
Protein- and cell type- centered sampling PTCS Keep protein and cell type profiles