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Table 1 Pearson correlation coefficients of bin methylation level for positive and negative DNA strands at various bin sizes (bp). Cell line: GM12878, Data: RRBS

From: MeDEStrand: an improved method to infer genome-wide absolute methylation levels from DNA enrichment data

bin size chr1 chr2 chr11 chr12 chr21 chr22
25 0.96 0.95 0.96 0.96 0.96 0.96
50 0.93 0.92 0.93 0.94 0.94 0.94
100 0.88 0.87 0.87 0.89 0.89 0.88
150 0.86 0.86 0.85 0.88 0.85 0.85
200 0.86 0.85 0.84 0.87 0.85 0.84
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BMC Bioinformatics

ISSN: 1471-2105

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