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Table 1 Pearson correlation coefficients of bin methylation level for positive and negative DNA strands at various bin sizes (bp). Cell line: GM12878, Data: RRBS

From: MeDEStrand: an improved method to infer genome-wide absolute methylation levels from DNA enrichment data

bin size

chr1

chr2

chr11

chr12

chr21

chr22

25

0.96

0.95

0.96

0.96

0.96

0.96

50

0.93

0.92

0.93

0.94

0.94

0.94

100

0.88

0.87

0.87

0.89

0.89

0.88

150

0.86

0.86

0.85

0.88

0.85

0.85

200

0.86

0.85

0.84

0.87

0.85

0.84

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BMC Bioinformatics

ISSN: 1471-2105

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