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Fig. 3 | BMC Bioinformatics

Fig. 3

From: SMARTcleaner: identify and clean off-target signals in SMART ChIP-seq analysis

Fig. 3

SMARTcleaner in SE mode. a Two examples showing the cleaning results of SE mode at one poly(T) and one poly(A) locus. b Cleaning result in a genomic region. c, d Genome-wide reads distribution near the poly(T/A) sites before (red and blue lines) and after (green lines) cleaning. e Percentages of removed reads at poly(T/A) sites in samples prepared by ligation or SMART protocols. The sample order is the same as in Fig. 2e

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