Fig. 4
From: An integrated package for bisulfite DNA methylation data analysis with Indel-sensitive mapping
Visualization of the methylation levels in chromosome scale. a The methyl-cytosine density in human chromosome 10. The dots represent the methylation levels in sliding windows of 100Kb with a step of 50Kb. The red dots refer to the methylation levels in the plus strand, and the blue dots refer to the methylation levels in the minus strand. b An example about the distributions of the DNA methylation levels and differentially-methylated regions (DMRs) between H9 and IMR90 cell lines in human chromosome 10. c The density of genes, transposon elements (TEs) and the level of DNA methylation in the whole rice genome. Panel A is the results generated from Batmeth2. Panel B is the visualization results from UCSC browser, with the BED files from Batmeth2