Skip to main content

Table 1 Running time (in seconds) from different aligners for real bisulfite reads with length 90 bp

From: An integrated package for bisulfite DNA methylation data analysis with Indel-sensitive mapping

BatMeth

BatMeth2

Bismark-b1

Bismark-b2

Bismark-L15

456

681

633

1869

2102

BWA-Meth

Biscuit

BS Seeker

BSmap

BSmooth

498

1256

1173

774

3740