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Table 2 Medium range accuracy evaluation 1. Average medium range accuracy values at δ = 2 resolution for the top 10, top L/10, and top L/5 contact predictions from various predictors (with our methods listed in bold font) evaluated on CASP11 targets and sorted by Top 10 accuracy scores

From: Predicting protein residue-residue contacts using random forests and deep networks

Method Top 10 L/10 L/5
RaptorX-Contact (94) 84.68% 80.57% 77.90%
CONSIP2 (94) 84.50% 82.18% 79.28%
MLiD (94) 77.34% 74.82% 70.92%
rf_full (78) 74.49% 73.48% 69.91%
rf_select (78) 65.51% 63.28% 61.47%
svm (78) 62.18% 60.60% 58.76%
sda_Ensemble (78) 60.26% 59.59% 57.15%
MULTICOM-NOVEL (94) 58.41% 57.59% 57.22%
IASL-COPE (91) 55.97% 52.63% 52.54%
sda_balanced (78) 54.87% 53.76% 51.96%
PLCT (91) 54.82% 55.65% 55.91%
Pcons-net (87) 53.22% 52.18% 51.85%
DCA_cpp (88) 50.85% 44.89% 40.65%
sda_unbalanced (78) 44.93% 46.50% 46.69%
raghavagps-paaint (76) 43.29% 44.04% 43.84%
FoDTcm (32) 25.00% 30.79% 30.60%