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Table 5 Medium range accuracy evaluation 2. Average medium range accuracy values at δ = 1 resolution for the top 10, top L/10, and top L/5 contact predictions from various predictors (with our methods listed in bold font) evaluated on CASP11 targets and sorted by Top 10 accuracy scores

From: Predicting protein residue-residue contacts using random forests and deep networks

Method Top 10 L/10 L/5
CONSIP2 (94) 80.74% 77.50% 73.01%
RaptorX-Contact (94) 77.77% 73.34% 68.28%
MLiD (94) 66.49% 63.34% 58.86%
rf_full (78) 61.15% 60.06% 56.63%
rf_select (78) 56.41% 53.23% 49.81%
MULTICOM-NOVEL (94) 54.84% 53.89% 52.80%
PLCT (91) 51.93% 53.02% 53.36%
Pcons-net (87) 49.87% 48.60% 48.02%
sda_Ensemble (78) 48.08% 46.78% 43.54%
svm (78) 47.18% 43.87% 42.41%
IASL-COPE (91) 45.78% 42.75% 42.55%
DCA (88) 42.32% 36.06% 31.16%
sda_balanced (78) 40.90% 39.06% 37.39%
sda_unbalanced (78) 33.08% 33.39% 34.02%
raghavagps-paaint (76) 32.63% 32.22% 32.48%
FoDTcm (32) 11.25% 17.87% 18.87%