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Table 2 The logit transformation and regularized log-likelihood for both classifiers (WLR and WKLR)

From: Analyzing a co-occurrence gene-interaction network to identify disease-gene association

Model

Logit transformation

Regularized log-likelihood

WLR

\( {ln \left (\frac {p_{i}}{1-p_{i}} \right)=X_{i}\beta } \text {(1)}\)

\( {lnL\left (\beta \right) = \sum \limits _{i=1}^{n} w_{i}ln\left (\frac {e^{y_{i}x_{i}\beta }}{1+e^{x_{i}\beta }} \right)- \frac {\lambda }{2}\left \| \beta \right \|^{2}} \text {(2)}\)

WKLR

\( {ln\left (\frac {p_{i}}{1-p_{i}} \right) = k_{i}\alpha } \text {(3)}\)

\( { lnL_{W}\left (\alpha \right) = \sum \limits _{i=1}^{n} w_{i}ln\left (\frac {e^{y_{i}k_{i}\alpha }}{1+e^{k_{i}\alpha }} \right)- \frac {\lambda }{2}\alpha ^{T}K\alpha } \text {(4)}\)

  1. The detailed description for each equation is reported in “Rare-event classification:” section