Table 1 Area under the ROC curve (AUROC), showing stem/loop classification of reactivity scoring methods
| Â | icSHAPE | PARS | ||
|---|---|---|---|---|
Method | in vivo | in vitro | V1(cont) | S1(case) |
Count | *0.555 | *0.514 | * 0.702 | * 0.349 |
Score | *0.600 | *0.564 | *0.574 | Â |
BUMHMM | *0.592 | *0.526 | *0.634 †|  |
PROBer | 0.645 | 0.607 | *0.639 †|  |
IDR | *0.563 | *0.518 | * 0.664 | * 0.375 |
reactIDR | 0.665 | 0.626 | 0.715 | 0.420 |