Table 2 Detailed description of the simulated data used for the evaluation: For each simulated dataset, the number of families, the number of genes per family, the average number of CDS, the average CDS length, the average gene length, and the average pairwise PID in families are given
From: SplicedFamAlign: CDS-to-gene spliced alignment and identification of transcript orthology groups
Small | Medium | Large | |
|---|---|---|---|
Number of families | 36 | 36 | 36 |
Number of genes per family | 5 | 5 | 5 |
Avg. number of CDS | 8.86 | 8.03 | 9.30 |
(2.95) | (2.78) | (2.87) | |
Avg. CDS length | 808.24 | 779.44 | 799.40 |
(175.79) | (186.66) | (214.40) | |
Avg. gene length | 2556.83 | 2358.60 | 2477.95 |
(537.93) | (548.06) | (552.02) | |
Avg. pairwise PID | 76.25 | 39.20 | 11.42 |
(18.92) | (13.85) | (3.86) |