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Table 1 The number of individuals and SNPs before and after quality control in the HapMap3 data

From: Identification of trans-eQTLs using mediation analysis with multiple mediators

 

Sample Size

# SNPs before quality control

# SNPs after quality control

LWK

83

1533540

953834

MKK

135

1541375

989807

YRI

107

1505108

943161

LWK+MKK+YRI

325

NAa

740158

CEU

107

1416121

787357

CHB

79

1332120

675811

JPT

81

1300764

643419

CHB+JPT

160

NA

540684

  1. aNA: data is not available