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Fig. 3 | BMC Bioinformatics

Fig. 3

From: Constructing effective energy functions for protein structure prediction through broadening attraction-basin and reverse Monte Carlo sampling

Fig. 3

Broadening the native attraction-basin of protein 1ctfA as iteration proceeds. Here, x-axis denotes the number of iterations, and y-axis denotes the RMSD between the native structure and the edge point conformations. For the weighting scheme at each iteration, a total of 50 paths were generated, thus yielding 50 edge point conformations. The mean RMSD increases as iteration proceeds, suggesting that the native attraction-basin was broadened

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