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Table 1 Three benchmark proteins used in the study

From: Constructing effective energy functions for protein structure prediction through broadening attraction-basin and reverse Monte Carlo sampling

PDB ID

Chain

Class

#Residues

# α helices

# β strands

1ctf

A

α + β

68

4(38)

3(18)

1ilo

A

α/ β

77

3(27)

4(18)

1iie

A

all α

75

3(42)

-

  1. The 3 proteins come from 3 different SCOP classes: all α (Class A), α/ β (Class C), α + β (class D). Residue numbers are 68, 77, 75, respectively. Columns 5 and 6 shows the number and total length of α helices and β strands
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BMC Bioinformatics

ISSN: 1471-2105

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