CeModule: an integrative framework for discovering regulatory patterns from genomic data in cancer

BMC Bioinformatics

Table 1 The top 10 lncRNAs, miRNAs and mRNAs with the highest degree, closeness centrality, and betweenness centrality in OV

Rank	Degree			Betweenness			Closeness
Rank	lncRNAs	miRNAs	mRNAs	lncRNAs	miRNAs	mRNAs	lncRNAs	miRNAs	mRNAs
1	MALAT1	let-7b	RPS16	MALAT1	mir-10a	TCF7L1	LINC00240	mir-155	NME5
2	NEAT1	mir-10a	RPS11	NEAT1	let-7b	SNRPF	RP11-403I13.8	mir-506	HIF3A
3	GAS5	mir-99b	RPS5	H19	mir-30a	PTP4A3	MALAT1	mir-206	TCF7L1
4	H19	mir-10b	RPS18	GAS5	mir-146a	PRRX2	NEAT1	mir-223	LRRC6
5	SNHG1	mir-30a	RPS8	TUG1	mir-375	PNISR	FGD5-AS1	mir-10a	ACTG1
6	TUG1	mir-143	SRGN	FGD5-AS1	mir-149	NR5A1	H19	mir-30a	PNISR
7	FGD5-AS1	mir-182	TYROBP	SNHG5	mir-99b	LRRC6	TUG1	let-7b	PRRX2
8	SNHG5	mir-183	RPL11	XIST	mir-183	HIF3A	XIST	mir-197	PTP4A3
9	XIST	mir-200c	ALOX5AP	SNHG1	mir-143	CTSD	SNHG1	mir-146a	CTSD
10	MEG3	mir-25	RPL3	SNHG3	mir-320a	ACTG1	SNHG14	mir-25	SNRPF

ISSN: 1471-2105