Predicting protein-ligand binding residues with deep convolutional neural networks

BMC Bioinformatics

Table 5 Prediction results for the baselines and stdDCS-SI on the testing sets

TestSet	Evaluation	TM-SI ¹	S-SI ²	COF ³	COA ⁴	stdDCS-SI ⁵
SITA	MCC	0.337	0.293	0.411	0.423	0.476
	Precision	32.16	21.93	42.06	32.97	58.64
	Recall	47.24	55.71	49.24	75.20	45.82
SIEX1	MCC	0.313	0.280	0.364	0.391	0.465
	Precision	29.93	21.48	36.90	30.59	56.26
	Recall	43.74	52.49	44.53	69.44	45.01
SIEX2	MCC	0.284	0.267	0.325	0.358	0.452
	Precision	26.64	20.61	32.70	27.90	53.78
	Recall	40.42	50.04	40.20	64.44	44.01
SIEX3	MCC	0.278	0.263	0.315	0.343	0.449
	Precision	26.44	20.60	31.79	27.07	53.07
	Recall	39.21	48.41	38.70	61.54	43.90

ISSN: 1471-2105