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Table 1 Comparison of sub-selection test between different families with different number of selected sequences

From: Greedy de novo motif discovery to construct motif repositories for bacterial proteomes

Num of sequences Coverage Computational time
2 5% 1m
10 51% 5m
20 62% 10m
50 70% 15m
100 74% 30m
250 78% 2h
500 83% 5h
1000 90% 16h
> 2000  100% > 2d
  1. The number of sequences, the motif coverage in percentage (which is the average of 10 repeated test) and the computational time on 1 CPU are shown