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Table 3 Putative ORFs resulting from Tblastn query for EST sequence similarity search obtained for O. sativaFEDRO ORFs

From: FEDRO: a software tool for the automatic discovery of candidate ORFs in plants with c →u RNA editing

seq

start

stop

strand

start

orf

orf

blastp

similarity found

nr.

type

type

type

codon

length

type

bitscore

organism

1

Main

Edited

fwd

50237

378

sub

216, 221

O. officinalis

  1. Best hit bitscore and organism where the significant sequence similarity has been found are reported for each ORF. This table contains sequence similarity results corresponding to BLAST bitscore ≥ 200