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Table 6 Number of overlapping intervals found by the tools for the first scenario of semi-synthetic datasets

From: JOA: Joint Overlap Analysis of multiple genomic interval sets

Simulations 1st Scenario (#ofFiles,#ofIntervals)

Number of Overlapping Intervals Found

 

GROK

BEDOPS

BEDTools

JOA ST

JOA ISTF

(2,100000)

3958

3761

3913

3913

3913

(4,100000)

5

5

5

5

5

(8,100000)

0

0

0

0

0

(16,100000)

0

0

0

0

0

(32,100000)

0

0

0

0

0

(64,100000)

0

0

0

0

0

(128,100000)

0

0

0

0

0

(256,100000)

-

0

0

0

0

(512,100000)

-

0

0

0

0