From: JOA: Joint Overlap Analysis of multiple genomic interval sets
Simulations 1st Scenario (#ofFiles,#ofIntervals) | Number of Overlapping Intervals Found | ||||
---|---|---|---|---|---|
GROK | BEDOPS | BEDTools | JOA ST | JOA ISTF | |
(2,100000) | 3958 | 3761 | 3913 | 3913 | 3913 |
(4,100000) | 5 | 5 | 5 | 5 | 5 |
(8,100000) | 0 | 0 | 0 | 0 | 0 |
(16,100000) | 0 | 0 | 0 | 0 | 0 |
(32,100000) | 0 | 0 | 0 | 0 | 0 |
(64,100000) | 0 | 0 | 0 | 0 | 0 |
(128,100000) | 0 | 0 | 0 | 0 | 0 |
(256,100000) | - | 0 | 0 | 0 | 0 |
(512,100000) | - | 0 | 0 | 0 | 0 |