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Table 7 Number of overlapping intervals found by the tools for the second scenario of semi-synthetic datasets

From: JOA: Joint Overlap Analysis of multiple genomic interval sets

Simulations 2nd Scenario (#ofFiles,#ofIntervals)

Number of Overlapping Intervals Found

 

GROK

BEDOPS

BEDTools

JOA ST

JOA ISTF

(2,1M)

432665

280649

402931

402931

402931

(2,2M)

1741459

804859

1613107

1613107

1613107

(2,4M)

6509486

1785275

6455690

6455690

6455690

(2,8M)

20936796

2706065

25812190

25812190

25812190

(2,16M)

55354698

2336735

103245490

103245490

103245490