From: JOA: Joint Overlap Analysis of multiple genomic interval sets
Simulations 2nd Scenario (#ofFiles,#ofIntervals) | Number of Overlapping Intervals Found | ||||
---|---|---|---|---|---|
GROK | BEDOPS | BEDTools | JOA ST | JOA ISTF | |
(2,1M) | 432665 | 280649 | 402931 | 402931 | 402931 |
(2,2M) | 1741459 | 804859 | 1613107 | 1613107 | 1613107 |
(2,4M) | 6509486 | 1785275 | 6455690 | 6455690 | 6455690 |
(2,8M) | 20936796 | 2706065 | 25812190 | 25812190 | 25812190 |
(2,16M) | 55354698 | 2336735 | 103245490 | 103245490 | 103245490 |