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Table 5 Statistical informations about validated predictions from RNA-Seq data

From: RhoTermPredict: an algorithm for predicting Rho-dependent transcription terminators based on Escherichia coli, Bacillus subtilis and Salmonella enterica databases

  C/G < 1.5 1.5 < = C/G < 2 2 < = C/G < 2.5 2.5 < = C/G < 3 C/G > = 3
Number of predictions 2930 1206 254 67 37
Read value ratios mean 13.3 9.3 7 10.2 10.5
Read value ratios std 168.1 25.7 9.4 13.1 10.5
Read value ratios median 3.2 3.3 3.4 4.4 5.2
Read value ratios > 100 33 13 0 0 0
  1. The number of predictions, the mean, the median and the standard deviation of read value ratios were reported for various window of the predicted RUT site C/G ratio values