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Table 1 Results of repfdr and repLIS procedure when top k=500

From: Replicability analysis in genome-wide association studies via Cartesian hidden Markov models

SNP ID Chr repfdr ranks repLIS ranks repfdr values repLIS values
rs7570682 2 35 1 3.7e-2
rs1375144 2 24 1 3.1e-2
rs2953145 2 25 1 3.2e-2
rs4276227s 3 105 64 6.4e-3 4.5e-2
rs683395s 3 99 51 6.1e-3 4.3e-2
rs10982256 9 305 1 7.9e-2
rs1344484 16 49 15 1.9e-3 2.3e-2
rs420259 16 255 115 1.5e-2 5.4e-2
rs3761218 20 233 1.4e-2 9.9e-1
  1. s The SNPs that are only identified by [28] and others are simultaneously identified by [29]. ’ −’ denotes a relevant SNP non-identified by the corresponding procedure. There is a significant improvement of rankings for most of these SNPs with replicated associations when conducting repLIS procedure