Table 2 Predicted conserved LEs and corresponding RMSDs of virtual structures by taking the whole Iridoviridae family as a single group
From: A voting mechanism-based linear epitope prediction system for the host-specific Iridoviridae family
Iridoviridae groups | Predictive LEs of representative peptide | Residue Location | RMSDs of structural alignment (Å) |
|---|---|---|---|
Iridoviridae family (Conserved LEs) | KAVGYDNMIGN | Iridovirus:145~155 | 0.533 |
KRNGYDNMIGN | Chloriridovirus:46~56 | ||
KRIGYDNMIGN | Lymphocystivirus:146~156 | ||
KRIGYDNMIGN | Megalocystivirus:146~156 | ||
KQSGYNKMIGM | Ranavirus:141~151 | ||
SNYTTASPVITSTS | Iridovirus:323~336 | 1.313 | |
SNYGTSSPVVSGTS | Chloriridovirus:222~233 | ||
SNYTSSSPVIFDGG | Lymphocystivirus:315~327 | ||
SNYTCVTPVNGPGN | Megalocystivirus:320~332 | ||
SNYTAASPVYVNNK | Ranavirus:311~323 | ||
RLNHMGSD | Iridovirus:360~367 | 0.9 | |
RLGTMGSD | Chloriridovirus:258~265 | ||
RLNEMGSE | Lymphocystivirus:352~359 | ||
RLANMGVE | Megalocystivirus:356~363 | ||
RLHQMGVD | Ranavirus:346~353 | ||
GAAGTGPAGSGQNFPQT | Iridovirus:424~442 | 1.122 | |
ASTGAGDGAGANYNQS | Chloriridovirus:324~339 | ||
TAGGNGGNTSGYKDAQK | Lymphocystivirus:415~434 | ||
AAAGGGNNNSGYNEPQR | Megalocystivirus:419~438 | ||
TAAGGGGNGTGYTVAQK | Ranavirus:409~428 |