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Fig. 3 | BMC Bioinformatics

Fig. 3

From: DNAscan: personal computer compatible NGS analysis, annotation and visualisation

Fig. 3

Identification of non-human reads Panel a shows the proportion of human reads (blue), viral reads (red) and unknown reads (yellow). Panel b shows the proportion for viral reads belonging to HIV (blue), PhiX174 (red) and to other viruses (yellow). Human reads are defined as reads which aligned to the human reference genome, viral reads as the reads which did not align to the human reference genome but aligned to at least one of the NCBI viral genomes and unknown reads as the reads which did not align either to the human or to any viral reference genomes. In panel c we plotted the numbers of aligned reads in logarithmic scale, for the 20 non-human microbe genomes to which the highest number of reads was aligned

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