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Fig. 2 | BMC Bioinformatics

Fig. 2

From: scruff: an R/Bioconductor package for preprocessing single-cell RNA-sequencing data

Fig. 2

Visualization of example data quality using scruff. These are boxplots with overlaid points showing (a) the total number of reads, (b) the fraction of aligned reads and (c) the fraction of mitochondrial transcripts for each experiment. Each point represents a well (unique cell barcode) and is colored by the number of cells sorted in the well by FACS. Each boxplot denotes a different experiment (i.e. plate)

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