Fig. 2
From: WASABI: a dynamic iterative framework for gene regulatory network inference
Cascade in silico GRN a Cascade GRN types are generated to study wave dynamics. Genes correspond to in vitro ones with their estimated parameters. S1 corresponds to stimulus. Genes are identified by our list gene ID. b Based on 10 in silico GRN we compare promoter wave time of early genes (blue) with other genes (red). Displayed are promoter waves with a wave time lower than 15h for graph clarity. c For each interactions of 10 in silico GRNs we compute the difference between estimated regulated promoter wave time minus its regulator protein wave time. Distribution of promoter/protein wave time difference is given for all interactions of all in silico GRNs