Table 1 The distribution of cluster size by different methods on yeast interactomes. The rightmost column is the gold standard used in this study
From: Integrating data and knowledge to identify functional modules of genes: a multilayer approach
Size | MCL | Walktrap | Infomap | MCODE | ClusterOne | NCMine | Isolation | CYC2008 |
|---|---|---|---|---|---|---|---|---|
3–10 | 342 | 158 | 275 | 135 | 426 | 1096 | 995 | 198 |
11–50 | 107 | 44 | 140 | 21 | 86 | 612 | 82 | 36 |
51–100 | 13 | 5 | 7 | 11 | 10 | 23 | 1 | 2 |
100–200 | 0 | 5 | 5 | 2 | 4 | 0 | 0 | 0 |
> 200 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |