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Table 1 Comparisons between Mouse Recon 1 and Mouse Recon 2

From: Dynamic genome-scale cell-specific metabolic models reveal novel inter-cellular and intra-cellular metabolic communications during ovarian follicle development

Property

Recon 1

Recon 2

Total number of reactions

4091

6172

Total number of metabolites

2950

4380

Number of unique metabolites

1535

2293

Number of metabolites in extracellular space

469

567

Number of metabolites in cytoplasm

1029

1357

Number of metabolites in mitochondrion

393

732

Number of metabolites in nucleus

95

155

Number of metabolites in endoplasmic reticulum

238

505

Number of metabolites in peroxisome

143

422

Number of metabolites in lysosome

219

251

Number of metabolites in Golgi apparatus

281

305

Number of unique genes

1776

2123

Number of subsystems

102

114

Number of blocked reactions (% of all reactions)

789 (19%)

1496 (24%)a

Number of dead-end metabolites

510

1181a

Number of metabolic functions (out of 363)

304

338a

  1. aBefore gap analysis: 1572 blocked reactions, 1254 dead ends and carry flow 337 of the evaluated functions