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Table 3 Correlation between GeneSurrounder results and network/gene statistics

From: GeneSurrounder: network-based identification of disease genes in expression data

Network/Gene statistic

GSE14764

GSE17260

GSE9891

Degree Cor.

0.044

0.070

0.038

Betweenness Cor.

0.047

0.059

0.030

pDE Cor.

0.060

0.103

− 0.051

  1. The three columns are the rank correlation between GeneSurrounder results (pGS) and network/gene statistics (Degree, Betweenness, and pDE) across all genes in each dataset. The Degree and Betweenness are two different network centrality measures. The Degree is the number of connections a node has and the Betweenness is the fraction of shortest paths that passes through the node. pDE is the p-value obtained from a standard differential expression t-test
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BMC Bioinformatics

ISSN: 1471-2105

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