From: Cross-population analysis for functional characterization of type II diabetes variants
S | Set of tagSNPs |
S i(j) | Set of tagSNPs in population i(j) |
L ij | Set of tagSNPs in population i that have significant LD partners in population j |
L ji | Set of tagSNPs in population j that have significant LD partners in population i |
G i(j) | Set of genes in population i(j) |
F i(j) | Set of functions in population i(j) |
Ν i(j) | Set of genes constituting most significant subnetwork in population i(j) |
S k | Set of tagSNPs that are significant in at least K populations |
L k | Set of tagSNPs that have significant LD partners in at least K populations |
G k | Set of genes that are associated with at least K populations |
F k | Set of functions that are associated with at least K populations |
N k | Set of genes, constituting the most significant networks, that are associated with at least K populations |