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Table 3 Percentage of short (< 1 kb) and long (> 1 kb) TEs that overlap with uniquely predicted DMRs by HOME and DSS, for CG, CHG and CHH contexts

From: HOME: a histogram based machine learning approach for effective identification of differentially methylated regions

Long TE (> 1 kb) Short TE (< 1 kb)
DMR finders CG CHG CHH CG CHG CHH
HOME 6% 69% 13% 0.9% 34% 8%
DSS 13% 3% 12% 2% 0.3% 4%