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Table 3 Survival analysis of BRCA-related miRNA sponge modules using FN, MCL, LINKCOMM and MCODE

From: miRspongeR: an R/Bioconductor package for the identification and analysis of miRNA sponge interaction networks and modules

Module methods

Module ID

Chi-square

p-value

HR

HRlow95

HRup95

FN

1

9.96

1.60E-03

2.75

1.41

5.38

2

8.32

3.92E-03

2.57

1.33

4.96

3

4.34

3.71E-02

1.95

1.00

3.80

5

4.72

2.98E-02

2.00

1.04

3.87

MCL

2

8.32

3.92E-03

2.57

1.33

4.96

4

4.72

2.98E-02

2.00

1.04

3.87

LINKCOMM

2

4.78

2.88E-02

2.03

1.04

3.94

5

14.67

1.28E-04

3.24

1.64

6.43

9

3.97

4.62E-02

1.94

1.01

3.73

10

5.41

2.00E-02

2.17

1.12

4.18

12

9.88

1.67E-03

2.81

1.45

5.46

MCODE

1

23.83

1.05E-06

4.52

2.26

9.03

2

23.84

1.05E-06

4.94

2.52

9.69

  1. HRlow95 and HRup95 denote the lower and upper of 95% confidence interval of HR, respectively. The identified significant miRNA sponge modules can distinguish the high and the low risk BRCA samples