Table 3 Assembly results on SARS-CoV metagenomic data for TAR-VIR and PRICE
From: TAR-VIR: a pipeline for TARgeted VIRal strain reconstruction from metagenomic data
| Â | Tool | # Contigs | N50 | Genomes Covered (%) | Mismatch (%) |
|---|---|---|---|---|---|
Bowtie2 L | TAR-VIR | 7 | 29,676 | 98.9 | 0.0 |
| Â | PRICE | 1 | 29,749 | 20.0 | 1.7 |
BWA B:1 | TAR-VIR | 6 | 29,706 | 99.5 | 0.0 |
| Â | PRICE | 1 | 29,750 | 20.0 | 1.66 |