Table 2 Summary for the rRNA gene databases used for this study
From: Taxonomy based performance metrics for evaluating taxonomic assignment methods
Database | Version | Sequence Type | Sequences | Taxa | Singletons |
|---|---|---|---|---|---|
RDP | V16 | 16S | 13,212 | 2472 | 1119 |
Greengenes | Aug2013 | 16S | 203,452 | 5405 | 2078 |
SILVA | V128 | 16S & 18S | 190,061 | 2078 | 1920 |