Table 1 Metabolic networks and their reaction-centric graphs
Strain (model) | Metabolic network (downloaded) | Reaction-centric graphs (converted) | ||||
|---|---|---|---|---|---|---|
Metabolites | Reactions | Genes | Metabolites | Reactions | Arcs | |
Escherichia coli (iJO1366) | 1805 | 2583 | 1367 | 2014 | 1251 | 9099 |
Bacillus subtilis (iYO844) | 990 | 1250 | 844 | 741 | 748 | 6489 |
Geobacter metallireducens (iAF987) | 1109 | 1285 | 987 | 835 | 900 | 8049 |
Klebsiella pneumoniae (iYL1228) | 1658 | 2262 | 1229 | 956 | 1137 | 8084 |
Saccharomyces cerevisiae (iMM904) | 1226 | 1577 | 905 | 1048 | 881 | 10,460 |