Fig. 5

Module detection. a Node color legend, b chromosome 1 biggest component, c chromosome 17 biggest component and d chromosome 11 biggest component. Nodes are colored according to their overlaid genomic annotation and/or chromatin states (a). Relevant lncRNAs and connected genes are highlighted as text. Known and validate cancer genes in c) are circled in red with dotted lines. Different modules from the clustering analysis are represented via different edges’ colors. ’Fuzzy’ nodes, i.e. nodes which could not be confidently assigned to any module, have connections colored in gray departing from them