From: edge2vec: Representation learning using edge semantics for biomedical knowledge discovery
node type | number | edge type | number | edge type description |
---|---|---|---|---|
gene | 21,738 | hprd | 30,215 | protein protein interaction |
compound | 258,003 | protein | 11,258 | has pathway |
chebi | 2,777 | tissue | 10,178 | tissue gene expression |
pathway | 192 | GO id | 95,422 | has GO |
sider | 1,051 | family name | 7,181 | has gene family |
gene-family | 329 | gene | 2,929 | cause disease |
GO | 9,710 | chebi | 15,986 | has chemical ontology |
substructure | 290 | drug | 943 | has pathway |
tissue | 507 | cid | 9,004 | cause side effect |
disease | 1,284 | expression | 16,167 | compound gene expression |
 |  | substructure | 6,169 | has substructure |
 |  | chemogenomics | 522,545 | bind |