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Table 1 Node and edge description in Chem2BioRDF

From: edge2vec: Representation learning using edge semantics for biomedical knowledge discovery

node type number edge type number edge type description
gene 21,738 hprd 30,215 protein protein interaction
compound 258,003 protein 11,258 has pathway
chebi 2,777 tissue 10,178 tissue gene expression
pathway 192 GO id 95,422 has GO
sider 1,051 family name 7,181 has gene family
gene-family 329 gene 2,929 cause disease
GO 9,710 chebi 15,986 has chemical ontology
substructure 290 drug 943 has pathway
tissue 507 cid 9,004 cause side effect
disease 1,284 expression 16,167 compound gene expression
   substructure 6,169 has substructure
   chemogenomics 522,545 bind