TY - JOUR AU - Shen, Ying AU - Li, Yaliang AU - Zheng, Hai-Tao AU - Tang, Buzhou AU - Yang, Min PY - 2019 DA - 2019/06/13 TI - Enhancing ontology-driven diagnostic reasoning with a symptom-dependency-aware Naïve Bayes classifier JO - BMC Bioinformatics SP - 330 VL - 20 IS - 1 AB - Ontology has attracted substantial attention from both academia and industry. Handling uncertainty reasoning is important in researching ontology. For example, when a patient is suffering from cirrhosis, the appearance of abdominal vein varices is four times more likely than the presence of bitter taste. Such medical knowledge is crucial for decision-making in various medical applications but is missing from existing medical ontologies. In this paper, we aim to discover medical knowledge probabilities from electronic medical record (EMR) texts to enrich ontologies. First, we build an ontology by identifying meaningful entity mentions from EMRs. Then, we propose a symptom-dependency-aware naïve Bayes classifier (SDNB) that is based on the assumption that there is a level of dependency among symptoms. To ensure the accuracy of the diagnostic classification, we incorporate the probability of a disease into the ontology via innovative approaches. SN - 1471-2105 UR - https://doi.org/10.1186/s12859-019-2924-0 DO - 10.1186/s12859-019-2924-0 ID - Shen2019 ER -