Fig. 7From: Performance assessment of variant calling pipelines using human whole exome sequencing and simulated dataAnalysis of depth and GQ of true SNVs missed (FN) by BWA and Novoalign alignments. Depth of the false negative SNVs on exome-1(a), − 2 (b), − 3(c) and − 4 (d) and InDels on exome-1(e), − 2(f), − 3(g) and − 4(h). Genotype quality of false negative SNVs on exome-1 to - 4 (i, j, k, and l) and InDels on exome-1 to − 4 (m, n, o and p) respectivelyBack to article page