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Table 2 Design of siRNAALL, siRNAI, and nonsense siRNA

From: Prediction of regulatory targets of alternative isoforms of the epidermal growth factor receptor in a glioblastoma cell line

siRNA

sequence 5′→3′

target mRNA

localization

corresponding mRNA

I

AACGCAUCCAGCAAGAAUA

EGFR I

4098-4116

NM_005228.3

ALL

CGGAAUAGGUAUUGGUGAA

EGFR I

1260-1278

NM_005228.3

  

EGFR II

 

NM_201282.1

  

EGFR III

 

NM_201283.1

  

EGFR IV

 

NM_201284.1

nonsense

CGTACGCGGAATACTTCGA

   
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BMC Bioinformatics

ISSN: 1471-2105

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