Table 1 SRAssembly of 20 Arabidopsis genes
From: SRAssembler: Selective Recursive local Assembly of homologous genomic regions
Rice query | Arabidopsis ortholog | Locus start | Locus end | Contig start | Contig end | Identity |
|---|---|---|---|---|---|---|
Os03g02970.1 | At1g01040.2 | 23121 | 31227 | 23070 | 32269 | 99.99 |
Os05g36260.1 | At1g01050.1 | 31170 | 33171 | 30480 | 33907 | 99.97 |
Os04g02900.1 | At1g01090.1 | 47234 | 49304 | 47020 | 49718 | 100 |
Os07g26940.1 | At1g01230.1 | 97412 | 99240 | 96394 | 99684 | 99.85 |
Os08g06060.1 | At1g01560.2 | 202103 | 204440 | 201313 | 205079 | 100 |
Os07g26660.1 | At1g01620.1 | 225665 | 227543 | 224898 | 228253 | 100 |
Os02g44470.1 | At1g01750.2 | 275188 | 276310 | 274408 | 277381 | 100 |
Os06g03660.2 | At1g01820.1 | 296001 | 298334 | 295251 | 298848 | 100 |
Os09g34970.1 | At1g01910.1 | 313101 | 316090 | 312601 | 316984 | 100 |
Os06g04000.1 | At1g01940.1 | 322886 | 324917 | 321925 | 326047 | 99.98 |
Os06g04560.1 | At1g01950.3 | 325316 | 330619 | 325316 | 331264 | 100 |
Os01g08450.1 | At1g02130.1 | 399983 | 401919 | 399420 | 401973 | 100 |
Os12g18880.1 | At1g02140.1 | 403100 | 404456 | 402439 | 405644 | 99.94 |
Os01g18860.1 | At1g02500.1 | 518091 | 520495 | 517829 | 521327 | 100 |
Os03g19510.1 | At1g02560.1 | 537740 | 540127 | 537158 | 540531 | 100 |
Os03g21940.1 | At1g02780.1 | 607799 | 609534 | 607187 | 609669 | 100 |
Os03g22340.1 | At1g02830.1 | 625084 | 625608 | 624076 | 626451 | 100 |
Os05g05260.1 | At1g03190.1 | 775527 | 780062 | 774617 | 780567 | 99.87 |
Os04g52130.1 | At1g03475.1 | 868853 | 871308 | 868050 | 872005 | 99.62 |
Os10g35370.1 | At1g03630.1 | 907523 | 909650 | 907182 | 909855 | 99.93 |