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Table 1 Microarray data sets excluded from the analyses and reason for their exclusion

From: Analyzing gene expression data for pediatric and adult cancer diagnosis using logic learning machine and standard supervised methods

GEO dataset accession

Disease

Reason for exclusion

GDS4562

Squamous cell carcinoma of the tongue

Non independent sampling: repeated measures

GDS4547

Clear cell renal carcinoma

Non independent sampling: repeated measures

GDS4395

Prostate cancer

Non independent sampling: repeated measures

GDS4284

Chronic lymphocytic leukaemia

Non independent sampling: repeated measures

GDS4088

Breast cancer

Non independent sampling: repeated measures

GDS4336

Pancreatic adenocarcinoma

Non independent sampling: different tissues from the same patient

GDS4282

Clear cell renal carcinoma

Non independent sampling: different tissues from the same patient

GDS4176

Chronic lymphocytic leukaemia

Non independent sampling: different tissues from the same patient

GDS3829

Chronic lymphocytic leukaemia

Non independent sampling: different tissues from the same patient

GDS4515

Colorectal adenocarcinoma

Insufficient sample size in at least one class

GDS4470

Glioblastoma

Insufficient sample size in at least one class

GDS4379

Colorectal cancer

Insufficient sample size in at least one class

GDS4305

Acute myeloid leukaemia

Insufficient sample size in at least one class

GDS4299

Acute lymphoblastic leukaemia

Insufficient sample size in at least one class

GDS4297

Acute lymphoblastic leukaemia

Insufficient sample size in at least one class

GDS4289

T-lymphoblastic leukaemia

Insufficient sample size in at least one class

GDS4210

Acute myeloid leukaemia

Insufficient sample size in at least one class

GDS4182

Acute myeloid leukaemia

Insufficient sample size in at least one class

GDS4168

Chronic lymphocytic leukaemia

Insufficient sample size in at least one class

GDS4167

Chronic lymphocytic leukaemia

Insufficient sample size in at least one class

GDS4503

Breast cancer

Insufficient sample size in at least one class

GDS3885

Glioblastoma and glioma

Insufficient sample size in at least one class

GDS3869

B-cell lymphoma

Insufficient sample size in at least one class

GDS3716

Breast cancer

Insufficient sample size in at least one class

GDS3897

Inflammatory bowel disease

No malignant cancer and insufficient sample size

GDS4813

Malignant melanoma

No available classes to compare

GDS4381

Colorectal cancer

Non-human tissue (transplantation on mice)

GDS4761

Breast cancer

No available classes for cancer diagnosis

GDS4718

Colorectal cancer

No available classes for cancer diagnosis

GDS4516

Colorectal cancer

No available classes for cancer diagnosis

GDS4589

Stage I endometrial cancer

No available classes for cancer diagnosis

GDS4513

Colon cancer

No available classes for cancer diagnosis

GDS4456

Bladder cancer

No available classes for cancer diagnosis

GDS4393

Colorectal cancer

No available classes for cancer diagnosis

GDS4278

Acute myeloid leukaemia

No available classes for cancer diagnosis

GDS4222

Hodgkin’s lymphoma

No available classes for cancer diagnosis

GDS4206

Acute lymphoid leukaemia

No available classes for cancer diagnosis

GDS4198

Gastric adenocarcinoma

No available classes for cancer diagnosis

GDS4181

Acute myeloid leukaemia

No available classes for cancer diagnosis

GDS4109

Prostate cancer

No available classes for cancer diagnosis

GDS4057

Breast cancer

No available classes for cancer diagnosis

GDS4056

Breast cancer

No available classes for cancer diagnosis

GDS3837

Non-small cell lung cancer

No available classes for cancer diagnosis

GDS3795

Myelodisplastic syndrome

No available classes for cancer diagnosis