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Table 1 Microarray data sets excluded from the analyses and reason for their exclusion

From: Analyzing gene expression data for pediatric and adult cancer diagnosis using logic learning machine and standard supervised methods

GEO dataset accessionDiseaseReason for exclusion
GDS4562Squamous cell carcinoma of the tongueNon independent sampling: repeated measures
GDS4547Clear cell renal carcinomaNon independent sampling: repeated measures
GDS4395Prostate cancerNon independent sampling: repeated measures
GDS4284Chronic lymphocytic leukaemiaNon independent sampling: repeated measures
GDS4088Breast cancerNon independent sampling: repeated measures
GDS4336Pancreatic adenocarcinomaNon independent sampling: different tissues from the same patient
GDS4282Clear cell renal carcinomaNon independent sampling: different tissues from the same patient
GDS4176Chronic lymphocytic leukaemiaNon independent sampling: different tissues from the same patient
GDS3829Chronic lymphocytic leukaemiaNon independent sampling: different tissues from the same patient
GDS4515Colorectal adenocarcinomaInsufficient sample size in at least one class
GDS4470GlioblastomaInsufficient sample size in at least one class
GDS4379Colorectal cancerInsufficient sample size in at least one class
GDS4305Acute myeloid leukaemiaInsufficient sample size in at least one class
GDS4299Acute lymphoblastic leukaemiaInsufficient sample size in at least one class
GDS4297Acute lymphoblastic leukaemiaInsufficient sample size in at least one class
GDS4289T-lymphoblastic leukaemiaInsufficient sample size in at least one class
GDS4210Acute myeloid leukaemiaInsufficient sample size in at least one class
GDS4182Acute myeloid leukaemiaInsufficient sample size in at least one class
GDS4168Chronic lymphocytic leukaemiaInsufficient sample size in at least one class
GDS4167Chronic lymphocytic leukaemiaInsufficient sample size in at least one class
GDS4503Breast cancerInsufficient sample size in at least one class
GDS3885Glioblastoma and gliomaInsufficient sample size in at least one class
GDS3869B-cell lymphomaInsufficient sample size in at least one class
GDS3716Breast cancerInsufficient sample size in at least one class
GDS3897Inflammatory bowel diseaseNo malignant cancer and insufficient sample size
GDS4813Malignant melanomaNo available classes to compare
GDS4381Colorectal cancerNon-human tissue (transplantation on mice)
GDS4761Breast cancerNo available classes for cancer diagnosis
GDS4718Colorectal cancerNo available classes for cancer diagnosis
GDS4516Colorectal cancerNo available classes for cancer diagnosis
GDS4589Stage I endometrial cancerNo available classes for cancer diagnosis
GDS4513Colon cancerNo available classes for cancer diagnosis
GDS4456Bladder cancerNo available classes for cancer diagnosis
GDS4393Colorectal cancerNo available classes for cancer diagnosis
GDS4278Acute myeloid leukaemiaNo available classes for cancer diagnosis
GDS4222Hodgkin’s lymphomaNo available classes for cancer diagnosis
GDS4206Acute lymphoid leukaemiaNo available classes for cancer diagnosis
GDS4198Gastric adenocarcinomaNo available classes for cancer diagnosis
GDS4181Acute myeloid leukaemiaNo available classes for cancer diagnosis
GDS4109Prostate cancerNo available classes for cancer diagnosis
GDS4057Breast cancerNo available classes for cancer diagnosis
GDS4056Breast cancerNo available classes for cancer diagnosis
GDS3837Non-small cell lung cancerNo available classes for cancer diagnosis
GDS3795Myelodisplastic syndromeNo available classes for cancer diagnosis