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Table 1 Trimming statistics for simulated reads corresponding to the average results for mate 1 and mate 2

From: FastqCleaner: an interactive Bioconductor application for quality-control, filtering and trimming of FASTQ files

  SEN SPC PPV NVP MCC
AdapterRemoval 0.999 1.000 1.000 0.999 0.999
Skewer 0.999 1.000 1.000 0.999 0.999
cutadapt 0.907 0.985 0.983 0.914 0.894
FastqCleaner 0.803 0.987 0.985 0.834 0.804
  1. Acronyms: sensitivity (SEN), specificity (SPC), positive predictive value (PPV), negative predictive value (NPV), and Matthews correlation coefficient (MCC)