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Table 3 Descriptive statistics of processed sequences

From: iMAP: an integrated bioinformatics and visualization pipeline for microbiome data analysis

Statistics

Original

Screened

Aligned

Denoised

NonChimeric

BacteriaOnly

NoMock

Minimum

14

8

6

6

6

6

6

1st Quantile

5365

4689

4658

4658

4336

4328

4328

Median

7996

7052

7012

7012

6590

6578

6578

Mean

10,088

8819

8767

8767

8119

8113

8113

3rd Quantile

13,630

11,937

11,870

11,870

10,740

10,733

10,733

Maximum

40,077

34,866

34,590

34,590

32,161

32,156

32,156

Total reads

3,631,769

3,174,898

3,156,040

3,156,040

2,922,704

2,920,782

2,920,782