From: iMAP: an integrated bioinformatics and visualization pipeline for microbiome data analysis
Statistics | Original | Screened | Aligned | Denoised | NonChimeric | BacteriaOnly | NoMock |
---|---|---|---|---|---|---|---|
Minimum | 14 | 8 | 6 | 6 | 6 | 6 | 6 |
1st Quantile | 5365 | 4689 | 4658 | 4658 | 4336 | 4328 | 4328 |
Median | 7996 | 7052 | 7012 | 7012 | 6590 | 6578 | 6578 |
Mean | 10,088 | 8819 | 8767 | 8767 | 8119 | 8113 | 8113 |
3rd Quantile | 13,630 | 11,937 | 11,870 | 11,870 | 10,740 | 10,733 | 10,733 |
Maximum | 40,077 | 34,866 | 34,590 | 34,590 | 32,161 | 32,156 | 32,156 |
Total reads | 3,631,769 | 3,174,898 | 3,156,040 | 3,156,040 | 2,922,704 | 2,920,782 | 2,920,782 |