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Fig. 11 | BMC Bioinformatics

Fig. 11

From: Shared data science infrastructure for genomics data

Fig. 11

Example of Boag programs to compute different tasks on the full RefSeq dataset. The python programs were running on the single core. The Hadoop infrastructure on Bridges has 5 shared nodes with 32 mappers. While these queries can be written in parallel in python, this needs more lines of code and more programming skills to write a parallel code

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BMC Bioinformatics

ISSN: 1471-2105

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