Fig. 8From: Sibe: a computation tool to apply protein sequence statistics to predict folding and design in silicoComparison of models predicted by Sibe (green) to the crystal structures (red). The models accurately recapitulate the structural details of the named proteins. The root-mean-square deviation (RMSD) of each protein was computed by PyMOL software [47] as shown, and the TM-scores are as follows: a YwlE (PDB ID: 1ZGG, RMSD 2.18Ã…, TM-score 0.76), b the flagellar capping protein (PDB ID: 5FHY, RMSD 3.16Ã…, TM-score 0.64), c the E. coli MCE protein MlaD (free modeling target in CASP12, PDB ID: 5UW2, RMSD 1.50Ã…, TM-score 0.80)Back to article page