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Table 2 Datasets used for analysis

From: Magic-BLAST, an accurate RNA-seq aligner for long and short reads

Name Type Number of Reads Average read length (bases) Range of read lengths (bases) Accession
iRefSeq Real 45,108 3427 147–109224 N/A
PacBio Real 8,285 1854 710–2703 SRR5009494
Roche Real 416,045 348 36–808 SRR899420
Illumina 101 + 101 Real 109 million 202 202–202 SRR534301
Illumina 250 + 250 Real 23.3 million 500 500–500 SRR5438850
Illumina 300 + 300 Real 16.5 million 600 600–600 SRR5437876
PacBio Brain Real 264,100 1323 46–6116 SRR5189652
PacBio testes Real 408,801 1307 42–7359 SRR5189667
Human T1 Simulated 10 million 200 200–200 N/A
Human T2 Simulated 10 million 200 200–200 N/A
Human T3 Simulated 10 million 200 200–200 N/A
Malaria T1 Simulated 10 million 200 200–200 N/A
Malaria T2 Simulated 10 million 200 200–200 N/A
Malaria T3 Simulated 10 million 200 200–200 N/A