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Table 3 Sets of species selected by GA using the species abundance as the input variables of logistic regression models

From: Selection of microbial biomarkers with genetic algorithm and principal component analysis

GA Selected SpeciesAUC
AdolescentisCatusEutactusGnavusMuciniphilaPrausnitzii0.87
AdolescentisDistasonisEutactusGnavusMuciniphilaPrausnitzii0.87
AerofaciensDistasonisEutactusGnavusLongumMuciniphila0.88
AnginosusDistasonisEutactusGnavusMuciniphilaPrausnitzii0.87
CatusDistasonisEutactusGnavusMuciniphilaPrausnitzii0.88
CatusEutactusGnavusLongumMuciniphilaPrausnitzii0.86
DistasonisEutactusGnavusLongumMuciniphilaPrausnitzii0.88
  1. GA Selected Species lists the set of species selected by GA, each row one set. AUC is the area under the ROC curve produced by the corresponding logistic regression model with the selected set of species. The result was cross validated with the same cross validation set up as the earlier experiments